cleanUrl: "fetching-pdb-files-fast"
description: "URL만을 활용하여 빠르게 PDB 형식 문자열을 얻는 방법을 알아봅니다."
간단히 아래 URL에서 PDB_ID 부분만 원하는 PDB ID로 변경하면 된다. 끝!
<https://files.rcsb.org/download/[PDB_ID].pdb>
| File Format | Action | Storage Compression | Example URL |
|---|---|---|---|
| Biological Assembly File in PDB | Download | Uncompressed | https://files.rcsb.org/download/1hh3.pdb1 |
| Biological Assembly File in PDB | Download | Compressed | https://files.rcsb.org/download/1hh3.pdb1.gz |
| Biological Assembly File in PDBx/mmCIF | Download | Uncompressed | https://files.rcsb.org/download/5a9z-assembly1.cif |
| Biological Assembly File in PDBx/mmCIF | Download | Compressed | https://files.rcsb.org/download/5a9z-assembly1.cif.gz |
| PDB | Download | Compressed | https://files.rcsb.org/download/4hhb.pdb.gz |
| PDB | Download | Uncompressed | https://files.rcsb.org/download/4hhb.pdb |
| PDBx/BinaryCIF | Download | Compressed | https://models.rcsb.org/4hhb.bcif.gz |
| PDBx/BinaryCIF | Download | Uncompressed | https://models.rcsb.org/4hhb.bcif |
| PDBx/mmCIF | Download | Compressed | https://files.rcsb.org/download/4hhb.cif.gz |
| PDBx/mmCIF | Download | Uncompressed | https://files.rcsb.org/download/4hhb.cif |
| XML | Download | Compressed | https://files.rcsb.org/download/4hhb.xml.gz |
| XML | Download | Uncompressed | https://files.rcsb.org/download/4hhb.xml |
| XML (header only) | Download | Compressed | https://files.rcsb.org/download/4hhb-noatom.xml.gz |
| XML (header only) | Download | Uncompressed | https://files.rcsb.org/download/4hhb-noatom.xml |
| Biological Assembly File in PDB | View | Uncompressed | https://files.rcsb.org/view/1hh3.pdb1 |
| Biological Assembly File in PDBx/mmCIF | View | Uncompressed | https://files.rcsb.org/view/5a9z-assembly1.cif |
| PDB | View | Uncompressed | https://files.rcsb.org/view/4hhb.pdb |
| PDB (header only) | View | Uncompressed | https://files.rcsb.org/header/4hhb.pdb |
| PDBx/mmCIF | View | Uncompressed | https://files.rcsb.org/view/4hhb.cif |
| PDBx/mmCIF (header only) | View | Uncompressed | https://files.rcsb.org/header/4hhb.cif |
| XML (header only) | View | Uncompressed | https://files.rcsb.org/view/4hhb-noatom.xml |
| FASTA sequences per PDB entry | Download | Uncompressed | /fasta/entry/4HHB/download |
|---|---|---|---|
FASTA sequence per polymer entity (identified by <pdb_id>_<entity_id>) |
Download | Uncompressed | /fasta/entity/4HHB_1/download |
FASTA sequence per polymer entity instance (chain) (identified by <pdb_id>.<asym_id>, please note this is the label_asym_id and not the author chain id) |
Download | Uncompressed | /fasta/chain/4HHB.A/download |
| Sequences in FASTA format for all entries in the PDB archive | Download | Compressed | https://ftp.wwpdb.org/pub/pdb/derived_data/pdb_seqres.txt.gz |
https://www.rcsb.org/docs/programmatic-access/file-download-services